Publications
Year 2006
Ammiraju, JS., M. Luo, J.L. Goicoechea, W. Wang, D. Kudrna, C. Mueller,
J.Talag, H. Kim, N.B. Sisneros, B. Blackmon, E. Fang, J.B. Tomkins,
D. Brar,D. MacKill, S. McCouch, N. Kurata, G. Lambert, D.W. Galbraith,
K.Arumuganathan, K. Rao, J.G. Walling, N. Gill, Y. Yu, P. SanMiguel,
C.Soderlund, S. Jackson, and R.A. Wing.
The Oryza bacterial artificialchromosome library resource: construction and analysis
of 12 deep-coveragelarge-insert BAC libraries that represent the 10 genome types of the genusOryza.
Genome Res 16: 140-147
PDF
Udall, J.A., J.M. Swanson, K. Haller, R.A. Rapp, M.E. Sparks, J. Hatfield,Y. Yu, Y. Wu,
C. Dowd, A.B. Arpat, B.A. Sickler, T.A. Wilkins, J.Y. Guo,X.Y. Chen, J. Scheffler,
E. Taliercio, R. Turley, H. McFadden, P. Payton, N.Klueva, R. Allen, D. Zhang, C. Haigler,
C. Wilkerson, J. Suo, S.R. Schulze,M.L. Pierce, M. Essenberg, H. Kim, D.J. Llewellyn,
E.S. Dennis, D. Kudrna,R. Wing, A.H. Paterson, C. Soderlund, and J.F. Wendel.
A globalassembly of cotton ESTs.
Genome Res 16: 441-450
PDF
Bruggmann, R., A.K. Bharti, H. Gundlach, J. Lai, S. Young, A.C. Pontaroli,
F. Wei, G. Haberer, G. Fuks, C. Du, C. Raymond, M.C. Estep, R. Liu, J.L.Bennetzen,
A.P. Chan, P.D. Rabinowicz, J. Quackenbush, W.B. Barbazuk, R.A.Wing, B. Birren,
C. Nusbaum, S. Rounsley, K.F. Mayer, and J. Messing.
Uneven chromosome contraction and expansion in the maize genome.
Genome Res16: 1241-1251
PDF
Piegu, B., R. Guyot, N. Picault, A. Roulin, A. Saniyal, H. Kim, K. Collura,
D.S. Brar, S. Jackson, R.A. Wing, and O. Panaud.
Doubling genome sizewithout polyploidization: dynamics of
retrotransposition-driven genomicexpansions in Oryza australiensis,
a wild relative of rice.
Genome Res 16:1262-1269
PDF
Hawkins, J.S., H. Kim, J.D. Nason, R.A. Wing, and J.F. Wendel.
Differential lineage-specific amplification of transposable elements
is responsible for genome size variation in Gossypium.
Genome Res 16: 1252-1261
PDF
Luo, M., H. Kim, D. Kudrna, N.B. Sisneros, S.J. Lee, C. Mueller,
K. Collura,A. Zuccolo, E.B. Buckingham, S.M. Grim, K. Yanagiya,
H. Inoko, T. Shiina,M.F. Flajnik, R.A. Wing, and Y. Ohta.
Construction of a nurse shark (Ginglymostoma cirratum) bacterial
artificial chromosome (BAC) library and apreliminary genome survey.
BMC Genomics 7: 106
PDF
Luo, M., Y. Yu, H. Kim, D. Kudrna, Y. Itoh, R.J. Agate, E. Melamed,
J.L.Goicoechea, J. Talag, C. Mueller, W. Wang, J. Currie,
N.B. Sisneros, R.A.Wing, and A.P. Arnold.
Utilization of a zebra finch BAC library todetermine the structure of
an avian androgen receptor genomic region.
Genomics 87: 181-190
PDF
Soderlund, C., K. Haller, V. Pampanwar, D. Ebbole, M. Farman,
M.J. Orbach,G.L. Wang, R. Wing, J.R. Xu, D. Brown, T. Mitchell, and R. Dean.
MGOS:A resource for studying Magnaporthe grisea and Oryza sativa interactions.
Mol Plant Microbe Interact 19: 1055-1061
Gowda, M., R.C. Venu, M.B. Raghupathy, K. Nobuta, H. Li, R. Wing, E.Stahlberg, S. Couglan,
C.D. Haudenschild, R. Dean, B.H. Nahm, B.C. Meyers,and G.L. Wang.
Deep and comparative analysis of the mycelium andappressorium transcriptomes
of Magnaporthe grisea using MPSS, RL-SAGE, andoligoarray methods.
BMC Genomics 7: 310
PDF
Cunningham, C., J. Hikima, M.J. Jenny, R.W. Chapman, G.C. Fang, C. Saski,M.L. Lundqvist,
R.A. Wing, P.M. Cupit, P.S. Gross, G.W. Warr, and J.P.Tomkins.
New resources for marine genomics: bacterial artificialchromosome libraries
for the Eastern and Pacific oysters (Crassostreavirginica and C. gigas).
Mar Biotechnol (NY) 8: 521-533
Hass-Jacobus, B.L., M. Futrell-Griggs, B. Abernathy, R. Westerman, J.L.Goicoechea,
J. Stein, P. Klein, B. Hurwitz, B. Zhou, F. Rakhshan, A. Sanyal,N. Gill, J.Y. Lin, J.G. Walling,
M.Z. Luo, J.S. Ammiraju, D. Kudrna, H.R.Kim, D. Ware, R.A. Wing, P. San Miguel, and S.A. Jackson.
Integrationof hybridization-based markers (overgos) into physical maps for comparativeand
evolutionary explorations in the genus Oryza and in Sorghum.
BMC Genomics 7: 199
PDF
Yan, H., H. Ito, K. Nobuta, S. Ouyang, W. Jin, S. Tian, C. Lu, R.C. Venu,G.L. Wang,
P.J. Green, R.A. Wing, C.R. Buell, B.C. Meyers, and J. Jiang.
Genomic and genetic characterization of rice Cen3 reveals extensivetranscription
and evolutionary implications of a complex centromere.
PlantCell 18: 2123-2133
PDF
Adema, C.M., Luo, M.Z., Hanelt, B., Hertel, L.A., Marshall, J.J., Zhang,S.M.,
DeJong, R.J., Kim, H.R., Kudrna, D., Wing, R.A., Soderlund, C.,Knight, M., Lewis,
F.A., Caldeira, R.L., Jannotti-Passos, L.K., Carvalho,O.d.S., Loker, E.S.
A BAC library for Biomphalaria glabrata,intermediate snail host of Schistosoma mansoni.
Mem Inst Oswaldo Cruz, Riode Janeiro, Vol. 101 (Suppl. 1): 167-177
PDF
Lin, Y.R., T.Y. Chow, M. Luo, D. Kudrna, C.C. Lin, R.A. Wing and Y.C. Hsing.
Two highly representiative rice BAC libraries of Japonica cv Tainung67 suitable
for rice structural and functional genomic research.
PlantScience
