Publications
Year 2008
Jetty S.S. Ammiraju, Fei Lu, Abhijit Sanyal, Yeisoo Yu, Xiang Song, Ning Jiang, Ana Clara Pontaroli,
Teri Rambo, Jennifer Currie, Kristi Collura, Jayson Talag, Chuanzhu Fan, Jose Luis Goicoechea,
Andrea Zuccolo, JIngfeng Chen, Jeffrey L. Bennetzen, Mingsheng Chen, Scott Jackson, and Rod A. Wing
Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set.
The Plant Cell 2008, published online December 2008, doi: 10.1105/tpc.108.063727
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Chuanzhu Fan, Yong Zhang, Yeisoo Yu, Steve Rounsley, Manyuan Long, and Rod A. Wing.
The Subtelomere of Oryza sativa Chromosome 3 Short Arm as a Hot Bed of New Gene Origination in Rice.
Molecular Plant 2008, Molecular Plant Advance Access published online on August 22, 2008, doi:10.1093/mp/ssn050
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Andrea Zuccolo, Jetty S. S. Ammiraju, HyeRan Kim, Abhijit Sanyal, Scott Jackson and Rod A. Wing.
Rapid and Differential Proliferation of the Ty3-Gypsy LTR Retrotransposon Atlantys in the Genus Oryza.
Rice 2008, DOI 10.1007/s12284-008-9002-y, published: 20 May 2008.
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Fusheng Wei and Rod A Wing.
A fruitful outcome to the papaya genome project.
Genome Biology 2008, 9:227, Published: 6 June 2008.
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Douglas E. Soltis, Victor A. Albert, Jim Leebens-Mack, Jeffrey D. Palmer,
Rod A. Wing, Claude W. dePamphilis, Hong Ma, John E. Carlson, Naomi Altman,
Sangtae Kim, P. Kerr Wall, Andrea Zuccolo and Pamela S. Soltis.
The Amborella genome: an evolutionary reference for plant biology.
Genome Biology 2008, 9:402, published: 10 March 2008.
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Peter J. Maughan, Nicholas Sisneros, Meizhong Luo, Dave
Kudrna, Jetty S. S. Ammiraju, and Rod A. Wing.
Construction of an Amaranthus hypochondriacus Bacterial
Artifi cial Chromosome Library and Genomic Sequencing of
Herbicide Target Genes
The Plant Genome [A Supplement to Crop Science], March 2008, No. 1
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Jessica A. Schlueter, Jose Luis Goicoechea, Kristi Collura, Navdeep Gill,
Jer-Young Lin, Yeisoo Yu, Dave Kudrna, Andrea Zuccolo, C. Eduardo Vallejos,
Monica Muñoz-Torre, Matthew W. Blair, Joe Tohme, Jeff Tomkins, Phillip McClean,
Rod A. Wing, Scott A. Jackson.
BAC-end Sequence Analysis and a Draft Physical Map of the Common Bean (Phaseolus vulgaris L.)
Genome. Tropical Plant Biol. (2008) 1:40-48, Published online: January 15, 2008.
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Corrinne E. Grover, Yeisoo Yu, Rod A. Wing, Andrew H. Paterson, Jonathan F. Wendel.
A phylogenetic analysis of indel dynamics in the cotton genus.
Molecular Biology and Evolution 2008; doi: 10.1093/molbev/msn085
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HyeRan Kim, Bonnie Hurwitz, Yeisoo Yu, Kristi Collura, Navdeep Gill,
Phillip SanMiguel, James C Mullikin, Christopher Maher,
William Nelson, Marina Wissotski, Michele Braidotti, David Kudrna,
José Luis Goicoechea, Lincoln Stein, Doreen Ware, Scott A Jackson,
Carol Soderlund and Rod A Wing.
Construction, alignment and analysis of twelve framework physical
maps that represent the ten genome types of the genus Oryza.
Genome Biology 2008, Volume 9, Issue 2, Article R45, published on February 28th, 2008.
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Rice Annotation Project, Tanaka T, Antonio BA, Kikuchi S, Matsumoto T, Nagamura Y,
Numa H, Sakai H, Wu J, Itoh T, Sasaki T, Aono R, Fujii Y, Habara T, Harada E, Kanno M,
Kawahara Y, Kawashima H, Kubooka H, Matsuya A, Nakaoka H, Saichi N, Sanbonmatsu R, Sato Y,
Shinso Y, Suzuki M, Takeda J, Tanino M, Todokoro F, Yamaguchi K, Yamamoto N, Yamasaki C,
Imanishi T, Okido T, Tada M, Ikeo K, Tateno Y, Gojobori T, Lin YC, Wei FJ, Hsing YI, Zhao Q,
Han B, Kramer MR, McCombie RW, Lonsdale D, O'Donovan CC, Whitfield EJ, Apweiler R, Koyanagi KO,
Khurana JP, Raghuvanshi S, Singh NK, Tyagi AK, Haberer G, Fujisawa M, Hosokawa S, Ito Y,
Ikawa H, Shibata M, Yamamoto M, Bruskiewich RM, Hoen DR, Bureau TE, Namiki N, Ohyanagi H,
Sakai Y, Nobushima S, Sakata K, Barrero RA, Sato Y, Souvorov A, Smith-White B, Tatusova T,
An S, An G, OOta S, Fuks G, Fuks G, Messing J, Christie KR, Lieberherr D, Kim H, Zuccolo A,
Wing RA, Nobuta K, Green PJ, Lu C, Meyers BC, Chaparro C, Piegu B, Panaud O, Echeverria M.
The Rice Annotation Project Database (RAP-DB): 2008 update.
Nucleic Acids Research, 2008, Vol. 36, Database issue, Published: December 17, 2007
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